PDB Entry (1v0y)
PDB ID: 1v0y Resolution: 1.71 Å Exp. Method: X-RAY DIFFRACTION
PMID: 15165852 DOI: 10.1016/J.JMB.2004.04.003
Protein
Protein Name: Phospholipase D
Uniprot ID/ACC: P84147 (P84147_STRSM) Organism: Streptomyces sp. (strain PMF)
Gene Symbol: - Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   dibutyrylphosphatidylcholine
Canonical SMILES:   CCCC(=O)OC[C@H](COP(O)(=O)OCC[N+](C)(C)C)OC(=O)CCC
Standard InChI:   InChI=1S/C16H32NO8P/c1-6-8-15(18)22-12-14(25-16(19)9-7-2)13-24-26(20,21)23-11-10-17(3,4)5/h14H,6-13H2,1-5H3/p+1/t14-/m1/s1
HET Code:   HI5 PubChem:   193376
DrugBank:   - ChEMBL:   -
Molecular Formula:   C16H33NO8P+ Mol. Weight:   398.19382 logP:   1.8814
HBD:   1 HBA:   7
#Rotatable Bonds:   14 TPSA:   108.36
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Phosphorylation HIS 170 A 11.18 6.73 Phosphate
Binding Affinity
-