PDB Entry (6qlm) |
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PDB ID: 6qlm | Resolution: 1.5 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: - | |
Protein |
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Protein Name: Cathepsin K | |
Uniprot ID/ACC: P43235 (CATK_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: CTSK | Gene ID: 1513 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: MIV-701 | ||
Canonical SMILES: O1CC(=O)[C@H]([C@H]12)N(C[C@@H]2F)C(=O)[C@H](CC(C)C)NC(=O)c3ccc(cc3)-c4nc(sc4)N5CCN(C)CC5 | ||
Standard InChI: InChI=1S/C27H34FN5O4S/c1-16(2)12-20(26(36)33-13-19(28)24-23(33)22(34)14-37-24)29-25(35)18-6-4-17(5-7-18)21-15-38-27(30-21)32-10-8-31(3)9-11-32/h4-7,15-16,19-20,23-24H,8-14H2,1-3H3,(H,29,35)/t19-,20-,23+,24+/m0/s1 | ||
HET Code: HFH | PubChem: 24883045 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C27H34FN5O4S | Mol. Weight: 543.23157 | logP: 2.2232 |
HBD: 1 | HBA: 8 | |
#Rotatable Bonds: 7 | TPSA: 95.08 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Hemi(thio)acetalization | CYS 25 | A | 22.36 | 13.26 | Ketone |
Binding Affinity |
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