PDB Entry (6Q35)
PDB ID: 6Q35 Resolution: 1.4 Å Exp. Method: X-RAY DIFFRACTION
PMID: 30996812 DOI: 10.1021/acsmedchemlett.8b00607
Protein
Protein Name: Beta-lactamase
Uniprot ID/ACC: Q09HD0 (Q09HD0_KLEPN) Organism: Klebsiella pneumoniae
Gene Symbol: blaGES5 Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   [5-(aminomethyl)-1-benzothiophen-2-yl]boronic acid
Canonical SMILES:   OB(O)c(s1)cc(c12)cc(cc2)C[NH3+]
Standard InChI:   InChI=1S/C9H10BNO2S/c11-5-6-1-2-8-7(3-6)4-9(14-8)10(12)13/h1-4,12-13H,5,11H2/p+1
HET Code:   HD5 PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C9H11BNO2S+ Mol. Weight:   208.0598 logP:   -0.677
HBD:   3 HBA:   3
#Rotatable Bonds:   2 TPSA:   68.1
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Borylation SER 64 B 12.62 - Boronic Acid
Binding Affinity
-