PDB Entry (1pw8)
PDB ID: 1pw8 Resolution: 1.3 Å Exp. Method: X-RAY DIFFRACTION
PMID: 15581896 DOI: 10.1016/j.jmb.2004.10.076
Protein
Protein Name: D-alanyl-D-alanine carboxypeptidase
Uniprot ID/ACC: P15555 (DAC_STRSR) Organism: Streptomyces sp. (strain R61)
Gene Symbol: - Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   (6R,7R)-3-[(ACETYLOXY)METHYL]-7-{[(6S)-6-(GLYCYLAMINO)-7-OXIDO-7-OXOHEPTANOYL]AMINO}-8-OXO-5-THIA-1-AZABICYCLO[4.2.0]OCTANE-2-CARBOXYLATE
Canonical SMILES:   CC(=O)OC[C@H]1CS[C@@H]2[C@H](NC(=O)CCCC[C@H](NC(=O)CN)C(O)=O)C(=O)N2[C@@H]1C(O)=O
Standard InChI:   InChI=1S/C19H28N4O9S/c1-9(24)32-7-10-8-33-17-14(16(27)23(17)15(10)19(30)31)22-12(25)5-3-2-4-11(18(28)29)21-13(26)6-20/h10-11,14-15,17H,2-8,20H2,1H3,(H,21,26)(H,22,25)(H,28,29)(H,30,31)/t10-,11-,14+,15-,17+/m0/s1
HET Code:   H2A PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C19H28N4O9S Mol. Weight:   488.15768 logP:   -1.8927
HBD:   5 HBA:   9
#Rotatable Bonds:   12 TPSA:   205.43
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Beta-Lactam Addition SER 62 A 18.53 - Beta-Lactam
Binding Affinity
-