PDB Entry (6hvf)
PDB ID: 6hvf Resolution: 2.1 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31857889 DOI: 10.1039/c9sc03445e
Protein
Protein Name: Proto-oncogene tyrosine-protein kinase Src
Uniprot ID/ACC: P00523 (SRC_CHICK) Organism: Gallus gallus (Chicken)
Gene Symbol: SRC Gene ID: 396442
Protein Class: TRANSFERASE
Ligand
Ligand Name:   ~{N}-[3-[3-ethyl-6-[4-(4-methylpiperazin-1-yl)phenyl]-4-oxidanylidene-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl]phenyl]prop-2-enamide
Canonical SMILES:   C=CC(=O)Nc1cc(ccc1)-c2c([nH]c(c23)ncn(c3=O)CC)-c4ccc(cc4)N5CC[NH+](C)CC5
Standard InChI:   InChI=1S/C28H30N6O2/c1-4-23(35)30-21-8-6-7-20(17-21)24-25-27(29-18-33(5-2)28(25)36)31-26(24)19-9-11-22(12-10-19)34-15-13-32(3)14-16-34/h4,6-12,17-18,31H,1,5,13-16H2,2-3H3,(H,30,35)/p+1
HET Code:   GUT PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C28H31N6O2+ Mol. Weight:   483.2503 logP:   2.5377
HBD:   3 HBA:   5
#Rotatable Bonds:   6 TPSA:   87.46
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 345 A 24.26 11.82 Vinyl Carbonyl
Binding Affinity
-