PDB Entry (1o4i) |
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PDB ID: 1o4i | Resolution: 1.75 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 14613321 | DOI: 10.1021/jm020970s | |
Protein |
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Protein Name: Proto-oncogene tyrosine-protein kinase Src | |
Uniprot ID/ACC: P12931 (SRC_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: SRC | Gene ID: 6714 |
Protein Class: SIGNALING PROTEIN |
Ligand |
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Ligand Name: PAS219 | ||
Canonical SMILES: O=Cc1ccccc1OP(=O)([O-])OCC2CCCCC2 | ||
Standard InChI: InChI=1S/C14H19O5P/c15-10-13-8-4-5-9-14(13)19-20(16,17)18-11-12-6-2-1-3-7-12/h4-5,8-10,12H,1-3,6-7,11H2,(H,16,17)/p-1 | ||
HET Code: 219 | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C14H18O5P- | Mol. Weight: 297.08972 | logP: 2.9432 |
HBD: 0 | HBA: 5 | |
#Rotatable Bonds: 6 | TPSA: 75.66 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Hemi(thio)acetalization | CYS 44 | A | 11.1 | 12.33 | Aldehyde |
Binding Affinity |
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Database Name | Value |
PDBBind | IC50 : 2300000 nM |
BindingDB | IC50 : 2300000 nM |