PDB Entry (6hwf) |
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PDB ID: 6hwf | Resolution: 2.5 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 30657666 | DOI: 10.1021/acs.jmedchem.8b01884 | |
Protein |
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Protein Name: Proteasome subunit beta type-1 | |
Uniprot ID/ACC: P38624 (PSB1_YEAST) | Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) |
Gene Symbol: PRE3 | Gene ID: 853456 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: ONX 0914 | ||
Canonical SMILES: c1ccccc1C[C@@H]([C@@H](O2)C2(C)C)NC(=O)[C@H](Cc3ccc(cc3)OC)NC(=O)[C@H](C)NC(=O)CN4CCOCC4 | ||
Standard InChI: InChI=1S/C31H42N4O6/c1-21(32-27(36)20-35-14-16-40-17-15-35)29(37)34-26(19-23-10-12-24(39-4)13-11-23)30(38)33-25(28-31(2,3)41-28)18-22-8-6-5-7-9-22/h5-13,21,25-26,28H,14-20H2,1-4H3,(H,32,36)(H,33,38)(H,34,37)/t21-,25-,26-,28+/m0/s1 | ||
HET Code: GQK | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C31H42N4O6 | Mol. Weight: 566.3104 | logP: 1.4643 |
HBD: 3 | HBA: 7 | |
#Rotatable Bonds: 13 | TPSA: 121.53 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Epoxide Opening | THR 1 | N | 27.36 | - | Epoxide |
Binding Affinity |
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