PDB Entry (6hwf)
PDB ID: 6hwf Resolution: 2.5 Å Exp. Method: X-RAY DIFFRACTION
PMID: 30657666 DOI: 10.1021/acs.jmedchem.8b01884
Protein
Protein Name: Proteasome subunit beta type-1
Uniprot ID/ACC: P38624 (PSB1_YEAST) Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Gene Symbol: PRE3 Gene ID: 853456
Protein Class: HYDROLASE
Ligand
Ligand Name:   ONX 0914
Canonical SMILES:   c1ccccc1C[C@@H]([C@@H](O2)C2(C)C)NC(=O)[C@H](Cc3ccc(cc3)OC)NC(=O)[C@H](C)NC(=O)CN4CCOCC4
Standard InChI:   InChI=1S/C31H42N4O6/c1-21(32-27(36)20-35-14-16-40-17-15-35)29(37)34-26(19-23-10-12-24(39-4)13-11-23)30(38)33-25(28-31(2,3)41-28)18-22-8-6-5-7-9-22/h5-13,21,25-26,28H,14-20H2,1-4H3,(H,32,36)(H,33,38)(H,34,37)/t21-,25-,26-,28+/m0/s1
HET Code:   GQK PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C31H42N4O6 Mol. Weight:   566.3104 logP:   1.4643
HBD:   3 HBA:   7
#Rotatable Bonds:   13 TPSA:   121.53
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Epoxide Opening THR 1 N 27.36 - Epoxide
Binding Affinity
-