PDB Entry (3wba) |
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PDB ID: 3wba | Resolution: 1.9 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 23811195 | DOI: 10.1016/j.abb.2013.06.005 | |
Protein |
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Protein Name: Beta-glucosidase 6 | |
Uniprot ID/ACC: Q8L7J2 (BGL06_ORYSJ) | Organism: Oryza sativa subsp. japonica (Rice) |
Gene Symbol: BGLU6 | Gene ID: 4332041 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: alpha-D-glucose | ||
Canonical SMILES: OC[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O | ||
Standard InChI: InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6+/m1/s1 | ||
HET Code: GLC | PubChem: 79025 | |
DrugBank: - | ChEMBL: CHEMBL423707 | |
Molecular Formula: C6H12O6 | Mol. Weight: 180.06339 | logP: -3.2214 |
HBD: 5 | HBA: 6 | |
#Rotatable Bonds: 1 | TPSA: 110.38 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Acyl Substitution | GLU 394 | A | 12.93 | 9.62 | Hemiacetal |
Binding Affinity |
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