PDB Entry (5c1y)
PDB ID: 5c1y Resolution: 1.97 Å Exp. Method: X-RAY DIFFRACTION
PMID: 27185390 DOI: 10.1002/jmr.2551
Protein
Protein Name: Genome polyprotein
Uniprot ID/ACC: A9XG43 (A9XG43_HE71) Organism: Human enterovirus 71 (EV71) (EV-71)
Gene Symbol: - Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   propan-2-yl N-[(1S)-1-{[(2S)-1-oxo-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl]carbamoyl}-2-phenylethyl]carbamate
Canonical SMILES:   c1ccccc1C[C@H](NC(=O)OC(C)C)C(=O)N[C@H](C=O)C[C@@H]2CCNC2=O
Standard InChI:   InChI=1S/C20H27N3O5/c1-13(2)28-20(27)23-17(10-14-6-4-3-5-7-14)19(26)22-16(12-24)11-15-8-9-21-18(15)25/h3-7,12-13,15-17H,8-11H2,1-2H3,(H,21,25)(H,22,26)(H,23,27)/t15-,16-,17-/m0/s1
HET Code:   GHY PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C20H27N3O5 Mol. Weight:   389.19507 logP:   0.9422
HBD:   3 HBA:   5
#Rotatable Bonds:   9 TPSA:   113.6
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Hemi(thio)acetalization CYS 147 A 15.97 14.33 Aldehyde
Binding Affinity
Database Name Value
PDBBind IC50 : 1246 nM