PDB Entry (5c1y) |
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PDB ID: 5c1y | Resolution: 1.97 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 27185390 | DOI: 10.1002/jmr.2551 | |
Protein |
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Protein Name: Genome polyprotein | |
Uniprot ID/ACC: A9XG43 (A9XG43_HE71) | Organism: Human enterovirus 71 (EV71) (EV-71) |
Gene Symbol: - | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: propan-2-yl N-[(1S)-1-{[(2S)-1-oxo-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl]carbamoyl}-2-phenylethyl]carbamate | ||
Canonical SMILES: c1ccccc1C[C@H](NC(=O)OC(C)C)C(=O)N[C@H](C=O)C[C@@H]2CCNC2=O | ||
Standard InChI: InChI=1S/C20H27N3O5/c1-13(2)28-20(27)23-17(10-14-6-4-3-5-7-14)19(26)22-16(12-24)11-15-8-9-21-18(15)25/h3-7,12-13,15-17H,8-11H2,1-2H3,(H,21,25)(H,22,26)(H,23,27)/t15-,16-,17-/m0/s1 | ||
HET Code: GHY | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C20H27N3O5 | Mol. Weight: 389.19507 | logP: 0.9422 |
HBD: 3 | HBA: 5 | |
#Rotatable Bonds: 9 | TPSA: 113.6 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Hemi(thio)acetalization | CYS 147 | A | 15.97 | 14.33 | Aldehyde |
Binding Affinity |
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Database Name | Value |
PDBBind | IC50 : 1246 nM |