PDB Entry (5c1x)
PDB ID: 5c1x Resolution: 1.86 Å Exp. Method: X-RAY DIFFRACTION
PMID: 27185390 DOI: 10.1002/jmr.2551
Protein
Protein Name: Genome polyprotein
Uniprot ID/ACC: A9XG43 (A9XG43_HE71) Organism: Human enterovirus 71 (EV71) (EV-71)
Gene Symbol: - Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   benzyl N-[(1S)-1-{[(2S)-1-oxo-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl]carbamoyl}-2-phenylethyl]carbamate
Canonical SMILES:   O=C1NCC[C@H]1C[C@@H](C=O)NC(=O)[C@H](Cc2ccccc2)NC(=O)OCc3ccccc3
Standard InChI:   InChI=1S/C24H27N3O5/c28-15-20(14-19-11-12-25-22(19)29)26-23(30)21(13-17-7-3-1-4-8-17)27-24(31)32-16-18-9-5-2-6-10-18/h1-10,15,19-21H,11-14,16H2,(H,25,29)(H,26,30)(H,27,31)/t19-,20-,21-/m0/s1
HET Code:   GHX PubChem:   44578234
DrugBank:   - ChEMBL:   CHEMBL478401
Molecular Formula:   C24H27N3O5 Mol. Weight:   437.19507 logP:   1.734
HBD:   3 HBA:   5
#Rotatable Bonds:   10 TPSA:   113.6
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Hemi(thio)acetalization CYS 147 A 16.42 14.69 Aldehyde
Binding Affinity
Database Name Value
PDBBind IC50 : 1767 nM