PDB Entry (5c1u)
PDB ID: 5c1u Resolution: 1.49 Å Exp. Method: X-RAY DIFFRACTION
PMID: 27185390 DOI: 10.1002/jmr.2551
Protein
Protein Name: Genome polyprotein
Uniprot ID/ACC: A9XG43 (A9XG43_HE71) Organism: Human enterovirus 71 (EV71) (EV-71)
Gene Symbol: - Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   (2E)-3-[4-(dimethylamino)phenyl]-N-[(1S)-1-{[(2S)-1-oxo-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl]carbamoyl}-2-phenylethyl]prop-2-enamide
Canonical SMILES:   CN(C)c1ccc(cc1)/C=C/C(=O)N[C@@H](Cc2ccccc2)C(=O)N[C@H](C=O)C[C@@H]3CCNC3=O
Standard InChI:   InChI=1S/C27H32N4O4/c1-31(2)23-11-8-19(9-12-23)10-13-25(33)30-24(16-20-6-4-3-5-7-20)27(35)29-22(18-32)17-21-14-15-28-26(21)34/h3-13,18,21-22,24H,14-17H2,1-2H3,(H,28,34)(H,29,35)(H,30,33)/b13-10+/t21-,22-,24-/m0/s1
HET Code:   GHV PubChem:   44578236
DrugBank:   - ChEMBL:   CHEMBL515638
Molecular Formula:   C27H32N4O4 Mol. Weight:   476.24237 logP:   1.7032
HBD:   3 HBA:   5
#Rotatable Bonds:   11 TPSA:   107.61
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Hemi(thio)acetalization CYS 147 A 15.28 14.67 Aldehyde
Binding Affinity
-