PDB Entry (3vpk)
PDB ID: 3vpk Resolution: 1.94 Å Exp. Method: X-RAY DIFFRACTION
PMID: 23161653 DOI: 10.1002/prot.24206
Protein
Protein Name: Cationic trypsin
Uniprot ID/ACC: P00760 (TRY1_BOVIN) Organism: Bos taurus (Bovine)
Gene Symbol: - Gene ID: 615026
Protein Class: HYDROLASE
Ligand
Ligand Name:   gabexate
Canonical SMILES:   CCOC(=O)c1ccc(OC(=O)CCCCCNC(N)=N)cc1
Standard InChI:   InChI=1S/C16H23N3O4/c1-2-22-15(21)12-7-9-13(10-8-12)23-14(20)6-4-3-5-11-19-16(17)18/h7-10H,2-6,11H2,1H3,(H4,17,18,19)
HET Code:   GHS PubChem:   3447
DrugBank:   DB12831 ChEMBL:   CHEMBL87563
Molecular Formula:   C16H23N3O4 Mol. Weight:   321.16885 logP:   1.81217
HBD:   3 HBA:   5
#Rotatable Bonds:   9 TPSA:   114.5
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Acyl Substitution SER 195 A 14.51 - Ester
Binding Affinity
-