PDB Entry (4f8b) |
||
| ||
PDB ID: 4f8b | Resolution: 2.5 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 22787148 | DOI: 10.1074/jbc.M112.388538 | |
Protein |
|
Protein Name: NADPH-dependent 7-cyano-7-deazaguanine reductase | |
Uniprot ID/ACC: O31678 (QUEF_BACSU) | Organism: Bacillus subtilis (strain 168) |
Gene Symbol: queF | Gene ID: 50133776 |
Protein Class: OXIDOREDUCTASE |
Ligand |
||
Ligand Name: 7-cyano-7-deazaguanine | ||
Canonical SMILES: O=c1[nH]c(N)nc(c12)[nH]cc2C#N | ||
Standard InChI: InChI=1S/C7H5N5O/c8-1-3-2-10-5-4(3)6(13)12-7(9)11-5/h2H,(H4,9,10,11,12,13) | ||
HET Code: GD1 | PubChem: 135446206 | |
DrugBank: DB03074 | ChEMBL: CHEMBL577120 | |
Molecular Formula: C7H5N5O | Mol. Weight: 175.04941 | logP: -0.29492 |
HBD: 3 | HBA: 4 | |
#Rotatable Bonds: 0 | TPSA: 111.35 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Addition to a Triple Bond | CYS 55 | B | 30.64 | 10.14 | Nitrile |
Binding Affinity |
||
- |