PDB Entry (3zvg)
PDB ID: 3zvg Resolution: 2.1 Å Exp. Method: X-RAY DIFFRACTION
PMID: 23388726 DOI: 10.1128/JVI.01123-12
Protein
Protein Name: Genome polyprotein
Uniprot ID/ACC: A1E4A3 (A1E4A3_HED68) Organism: Human enterovirus D68 (EV68) (EV-68)
Gene Symbol: - Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   ethyl (2E,4S)-4-[(2S)-2-[(2S,3R)-3-(tert-butoxy)-2-{[(tert-butoxy)carbonyl]amino}butanamido]-3-phenylpropanamido]-5-[(3S)-2-oxopyrrolidin-3-yl]pent-2-enoate
Canonical SMILES:   O=C1NCC[C@H]1C[C@@H](/C=C/C(=O)OCC)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H]([C@@H](C)OC(C)(C)C)NC(=O)OC(C)(C)C
Standard InChI:   InChI=1S/C33H50N4O8/c1-9-43-26(38)16-15-24(20-23-17-18-34-28(23)39)35-29(40)25(19-22-13-11-10-12-14-22)36-30(41)27(21(2)44-32(3,4)5)37-31(42)45-33(6,7)8/h10-16,21,23-25,27H,9,17-20H2,1-8H3,(H,34,39)(H,35,40)(H,36,41)(H,37,42)/b16-15+/t21-,23+,24-,25+,27+/m1/s1
HET Code:   G86 PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C33H50N4O8 Mol. Weight:   630.36285 logP:   2.9411
HBD:   4 HBA:   8
#Rotatable Bonds:   14 TPSA:   161.16
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 147 A 30.59 15.04 Vinyl Carbonyl
Binding Affinity
-