PDB Entry (3zv9) |
||
| ||
PDB ID: 3zv9 | Resolution: 2.05 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 23388726 | DOI: 10.1128/JVI.01123-12 | |
Protein |
|
Protein Name: Genome polyprotein | |
Uniprot ID/ACC: A1E4A3 (A1E4A3_HED68) | Organism: Human enterovirus D68 (EV68) (EV-68) |
Gene Symbol: - | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
||
Ligand Name: ethyl (2E,4S)-4-{[(tert-butoxy)carbonyl]amino}-5-[(3S)-2-oxopyrrolidin-3-yl]pent-2-enoate | ||
Canonical SMILES: CCOC(=O)/C=C/[C@@H](NC(=O)OC(C)(C)C)C[C@@H]1CCNC1=O | ||
Standard InChI: InChI=1S/C16H26N2O5/c1-5-22-13(19)7-6-12(10-11-8-9-17-14(11)20)18-15(21)23-16(2,3)4/h6-7,11-12H,5,8-10H2,1-4H3,(H,17,20)(H,18,21)/b7-6+/t11-,12+/m0/s1 | ||
HET Code: G74 | PubChem: 10903510 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C16H26N2O5 | Mol. Weight: 326.18417 | logP: 1.5252 |
HBD: 2 | HBA: 5 | |
#Rotatable Bonds: 6 | TPSA: 93.73 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Michael Addition | CYS 147 | A | 33.16 | 14.37 | Vinyl Carbonyl |
Binding Affinity |
||
- |