PDB Entry (3cmc)
PDB ID: 3cmc Resolution: 1.77 Å Exp. Method: X-RAY DIFFRACTION
PMID: 18480053 DOI: 10.1074/jbc.M802286200
Protein
Protein Name: Glyceraldehyde-3-phosphate dehydrogenase
Uniprot ID/ACC: P00362 (G3P_GEOSE) Organism: Geobacillus stearothermophilus (Bacillus stearothermophilus)
Gene Symbol: gap Gene ID: 58573429
Protein Class: OXIDOREDUCTASE
Ligand
Ligand Name:   gylceraldehyde-3-phosphate
Canonical SMILES:   O[C@H](COP(O)(O)=O)C=O
Standard InChI:   InChI=1S/C3H7O6P/c4-1-3(5)2-9-10(6,7)8/h1,3,5H,2H2,(H2,6,7,8)/t3-/m0/s1
HET Code:   G3H PubChem:   439168
DrugBank:   DB02263 ChEMBL:   CHEMBL1232918
Molecular Formula:   C3H7O6P Mol. Weight:   169.99803 logP:   -1.3445
HBD:   3 HBA:   4
#Rotatable Bonds:   4 TPSA:   104.06
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Hemi(thio)acetalization CYS 149 R 27.07 13.24 Aldehyde
Binding Affinity
-