PDB Entry (6hfv)
PDB ID: 6hfv Resolution: 2.05 Å Exp. Method: X-RAY DIFFRACTION
PMID: 30194385 DOI: 10.1038/s41598-018-31316-6
Protein
Protein Name: Decaprenylphosphoryl-beta-D-ribose oxidase
Uniprot ID/ACC: P9WJF1 (DPRE1_MYCTU) Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Gene Symbol: dprE1 Gene ID: 886125
Protein Class: OXIDOREDUCTASE
Ligand
Ligand Name:   8-nitro-2-(piperidin-1-yl)-6-(trifluoromethyl)-4H-1,3-benzothiazin-4-one
Canonical SMILES:   [O-][N+](=O)c1cc(C(F)(F)F)cc(c12)c(=O)nc(s2)N3CCCCC3
Standard InChI:   InChI=1S/C14H12F3N3O3S/c15-14(16,17)8-6-9-11(10(7-8)20(22)23)24-13(18-12(9)21)19-4-2-1-3-5-19/h6-7H,1-5H2
HET Code:   G1T PubChem:   67149102
DrugBank:   - ChEMBL:   CHEMBL2419032
Molecular Formula:   C14H12F3N3O3S Mol. Weight:   359.05515 logP:   3.5738
HBD:   0 HBA:   6
#Rotatable Bonds:   2 TPSA:   76.34
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Addition to a Double Bond CYS 387 B 27.75 10.04 Nitroarene
Binding Affinity
-