PDB Entry (1ree) |
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PDB ID: 1ree | Resolution: 1.6 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 8755744 | DOI: 10.1021/bi953052n | |
Protein |
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Protein Name: Endo-1,4-beta-xylanase 2 | |
Uniprot ID/ACC: P36217 (XYN2_HYPJR) | Organism: Hypocrea jecorina (strain ATCC 56765 / BCRC 32924 / NRRL 11460 / Rut C-30) (Trichoderma reesei) |
Gene Symbol: xyn2 | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: 3,4‐epoxybutyl‐beta‐D‐xyloside | ||
Canonical SMILES: O[C@@H]1CO[C@H]([C@H](O)[C@H]1O)OCC[C@@H]2CO2 | ||
Standard InChI: InChI=1S/C9H16O6/c10-6-4-15-9(8(12)7(6)11)13-2-1-5-3-14-5/h5-12H,1-4H2/t5-,6-,7+,8-,9-/m1/s1 | ||
HET Code: 07E | PubChem: 5287871 | |
DrugBank: - | ChEMBL: CHEMBL1231611 | |
Molecular Formula: C9H16O6 | Mol. Weight: 220.09468 | logP: -1.7691 |
HBD: 3 | HBA: 6 | |
#Rotatable Bonds: 4 | TPSA: 91.68 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Epoxide Opening | GLU 177 | B | 26.37 | 9.32 | Epoxide |
Binding Affinity |
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