PDB Entry (4l1o)
PDB ID: 4l1o Resolution: 2.3 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Aldehyde dehydrogenase, dimeric NADP-preferring
Uniprot ID/ACC: P30838 (AL3A1_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: ALDH3A1 Gene ID: 218
Protein Class: OXIDOREDUCTASE
Ligand
Ligand Name:   (3S)-1-[[4-(1,3-benzodioxol-5-ylmethyl)piperazin-1-yl]methyl]-3-oxidanyl-3H-indol-2-one
Canonical SMILES:   O=C1N(CN2CCN(Cc3ccc4OCOc4c3)CC2)c2ccccc2C1=O
Standard InChI:   InChI=1S/C21H21N3O4/c25-20-16-3-1-2-4-17(16)24(21(20)26)13-23-9-7-22(8-10-23)12-15-5-6-18-19(11-15)28-14-27-18/h1-6,11H,7-10,12-14H2
HET Code:   1VL PubChem:   1966642
DrugBank:   - ChEMBL:   CHEMBL3128211
Molecular Formula:   C21H21N3O4 Mol. Weight:   379.1532 logP:   1.7199
HBD:   0 HBA:   6
#Rotatable Bonds:   4 TPSA:   62.32
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Hemi(thio)acetalization CYS 243 A 17.76 16.0 Ketone
Binding Affinity
-