PDB Entry (5mhn)
PDB ID: 5mhn Resolution: 2.48 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Coagulation factor XIII A chain
Uniprot ID/ACC: P00488 (F13A_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: F13A1 Gene ID: 2162
Protein Class: HYDROLASE
Ligand
Ligand Name:   inhibitor ZED2360
Canonical SMILES:   C=COC(=O)c1scc(n1)C(=O)N[C@@H](CC/C=C/C(=O)OC)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](CC(C)C)C(=O)N2[C@@H](CCC2)C(=O)N[C@H](C(=O)N3[C@H](C)CCC3)Cc4c[nH]c(c45)cccc5
Standard InChI:   InChI=1S/C54H75N9O11S/c1-10-33(7)45(61-47(66)39(26-31(3)4)57-46(65)38(21-14-15-23-44(64)73-9)56-48(67)42-30-75-51(60-42)54(72)74-11-2)50(69)59-40(27-32(5)6)53(71)63-25-17-22-43(63)49(68)58-41(52(70)62-24-16-18-34(62)8)28-35-29-55-37-20-13-12-19-36(35)37/h11-13,15,19-20,23,29-34,38-41,43,45,55H,2,10,14,16-18,21-22,24-28H2,1,3-9H3,(H,56,67)(H,57,65)(H,58,68)(H,59,69)(H,61,66)/b23-15+/t33-,34+,38-,39-,40-,41-,43-,45-/m0/s1
HET Code:   1TX PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C54H75N9O11S Mol. Weight:   1057.5306 logP:   4.8546
HBD:   6 HBA:   13
#Rotatable Bonds:   26 TPSA:   267.4
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 314 A 14.25 - Vinyl Carbonyl
Binding Affinity
-