PDB Entry (1qx1) |
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PDB ID: 1qx1 | Resolution: 1.3 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 12960159 | DOI: 10.1074/jbc.M309249200 | |
Protein |
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Protein Name: Alpha-mannosidase 2 | |
Uniprot ID/ACC: Q24451 (MAN2_DROME) | Organism: Drosophila melanogaster (Fruit fly) |
Gene Symbol: alphaManIIa | Gene ID: 41126 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: 2-F-mannosyl-F | ||
Canonical SMILES: OC[C@@H]1[C@@H](O)[C@H](O)[C@H](F)[C@@H](O1)F | ||
Standard InChI: InChI=1S/C6H10F2O4/c7-3-5(11)4(10)2(1-9)12-6(3)8/h2-6,9-11H,1H2/t2-,3+,4-,5-,6-/m1/s1 | ||
HET Code: FMF | PubChem: 17753980 | |
DrugBank: - | ChEMBL: CHEMBL1232780 | |
Molecular Formula: C6H10F2O4 | Mol. Weight: 184.05472 | logP: -1.267 |
HBD: 3 | HBA: 4 | |
#Rotatable Bonds: 1 | TPSA: 69.92 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Acyl Substitution | ASP 204 | A | 13.57 | -3.67 | Alkyl Halide |
Binding Affinity |
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Database Name | Value |
PDBBind | Ki : 7500000 nM |