PDB Entry (4kh2) |
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PDB ID: 4kh2 | Resolution: 2.36 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 24036510 | DOI: 10.1038/nchembio.1357 | |
Protein |
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Protein Name: Alpha-L-iduronidase | |
Uniprot ID/ACC: P35475 (IDUA_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: IDUA | Gene ID: 3425 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: 2-deoxy-2-fluoro-alpha-L-idopyranosyluronic acid fluoride | ||
Canonical SMILES: O[C@H]1[C@H](O)[C@@H](O[C@@H](F)[C@@H]1F)C(O)=O | ||
Standard InChI: InChI=1S/C6H8F2O5/c7-1-2(9)3(10)4(6(11)12)13-5(1)8/h1-5,9-10H,(H,11,12)/t1-,2-,3+,4-,5-/m1/s1 | ||
HET Code: FIF | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C6H8F2O5 | Mol. Weight: 198.03398 | logP: -1.1747 |
HBD: 3 | HBA: 4 | |
#Rotatable Bonds: 1 | TPSA: 86.99 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Acyl Substitution | GLU 299 | A | 15.59 | 8.28 | Alkyl Halide |
Binding Affinity |
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