PDB Entry (6cwy)
PDB ID: 6cwy Resolution: 2.46 Å Exp. Method: X-RAY DIFFRACTION
PMID: 30514846 DOI: 10.1038/s41467-018-07015-1
Protein
Protein Name: SUMO-activating enzyme subunit 2
Uniprot ID/ACC: Q9UBT2 (SAE2_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: UBA2 Gene ID: 10054
Protein Class: TRANSFERASE
Ligand
Ligand Name:   CPD
Canonical SMILES:   c1ccccc1N[C@H]([C@]23C(C(=O)OC)=C(C(=O)OC)[C@H](O2)C=C3)Cc4ccc(C)cc4
Standard InChI:   InChI=1S/C25H25NO5/c1-16-9-11-17(12-10-16)15-20(26-18-7-5-4-6-8-18)25-14-13-19(31-25)21(23(27)29-2)22(25)24(28)30-3/h4-14,19-20,26H,15H2,1-3H3/t19-,20+,25-/m1/s1
HET Code:   FHJ PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C25H25NO5 Mol. Weight:   419.17328 logP:   3.36822
HBD:   1 HBA:   6
#Rotatable Bonds:   7 TPSA:   73.86
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 30 D 94.28 11.19 Vinyl Carbonyl
Binding Affinity
-