PDB Entry (5mhm)
PDB ID: 5mhm Resolution: 2.12 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Coagulation factor XIII A chain
Uniprot ID/ACC: P00488 (F13A_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: F13A1 Gene ID: 2162
Protein Class: HYDROLASE
Ligand
Ligand Name:   inhibitor ZED1630
Canonical SMILES:   Cc1scc(n1)C(=O)N[C@@H](CC/C=C/C(=O)OC)C(=O)N[C@@H](C)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CC(C)C)C(=O)N2[C@@H](CCC2)C(=O)N[C@H](C(=O)N)Cc3c[nH]c(c34)cccc4
Standard InChI:   InChI=1S/C43H59N9O9S/c1-23(2)19-32(43(60)52-18-12-16-34(52)41(58)49-31(37(44)54)20-27-21-45-29-14-9-8-13-28(27)29)50-42(59)36(24(3)4)51-38(55)25(5)46-39(56)30(15-10-11-17-35(53)61-7)48-40(57)33-22-62-26(6)47-33/h8-9,11,13-14,17,21-25,30-32,34,36,45H,10,12,15-16,18-20H2,1-7H3,(H2,44,54)(H,46,56)(H,48,57)(H,49,58)(H,50,59)(H,51,55)/b17-11+/t25-,30-,31-,32-,34-,36-/m0/s1
HET Code:   1TX PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C43H59N9O9S Mol. Weight:   877.41565 logP:   1.92082
HBD:   7 HBA:   11
#Rotatable Bonds:   21 TPSA:   263.88
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 314 A 13.93 19.8 Vinyl Carbonyl
Binding Affinity
-