PDB Entry (2xgb) |
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PDB ID: 2xgb | Resolution: 1.2 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 21085740 | DOI: 10.1039/C0MB00204F | |
Protein |
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Protein Name: Beta-amylase | |
Uniprot ID/ACC: P16098 (AMYB_HORVU) | Organism: Hordeum vulgare (Barley) |
Gene Symbol: BMY1 | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: 2,3- epoxypropyl-alpha-D-glucopyranoside | ||
Canonical SMILES: C1O[C@H]1CO[C@@H]2[C@H](O)[C@@H](O)[C@H](O)[C@H](O2)CO | ||
Standard InChI: InChI=1S/C9H16O7/c10-1-5-6(11)7(12)8(13)9(16-5)15-3-4-2-14-4/h4-13H,1-3H2/t4-,5-,6-,7+,8-,9+/m1/s1 | ||
HET Code: EPG | PubChem: 5288166 | |
DrugBank: - | ChEMBL: CHEMBL1232546 | |
Molecular Formula: C9H16O7 | Mol. Weight: 236.0896 | logP: -2.7983 |
HBD: 4 | HBA: 7 | |
#Rotatable Bonds: 4 | TPSA: 111.91 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Epoxide Opening | GLU 184 | A | 23.91 | 4.81 | Epoxide |
Binding Affinity |
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