PDB Entry (6c1i)
PDB ID: 6c1i Resolution: 2.26 Å Exp. Method: X-RAY DIFFRACTION
PMID: 30409975 DOI: 10.1038/s41467-018-07133-w
Protein
Protein Name: Peroxisome proliferator-activated receptor gamma
Uniprot ID/ACC: P37231 (PPARG_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: PPARG Gene ID: 5468
Protein Class: TRANSCRIPTION REGULATOR
Ligand
Ligand Name:   T0070907
Canonical SMILES:   Clc1ccc([N+](=O)[O-])cc1C(=O)Nc2ccncc2
Standard InChI:   InChI=1S/C12H8ClN3O3/c13-11-2-1-9(16(18)19)7-10(11)12(17)15-8-3-5-14-6-4-8/h1-7H,(H,14,15,17)
HET Code:   EEY PubChem:   2777391
DrugBank:   - ChEMBL:   CHEMBL510698
Molecular Formula:   C12H8ClN3O3 Mol. Weight:   277.02542 logP:   2.8955
HBD:   1 HBA:   4
#Rotatable Bonds:   3 TPSA:   85.13
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Aromatic Substitution CYS 285 A 66.45 15.49 Aryl Halide
Binding Affinity
Database Name Value
Binding MOAD IC50 : 85 nM