PDB Entry (5ezs)
PDB ID: 5ezs Resolution: 2.16 Å Exp. Method: X-RAY DIFFRACTION
PMID: 27030368 DOI: 10.1021/acs.biochem.5b00992
Protein
Protein Name: Polyprotein P1234
Uniprot ID/ACC: P27282 (POLN_EEVVT) Organism: Venezuelan equine encephalitis virus (strain Trinidad donkey) (VEEV)
Gene Symbol: - Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   E64d
Canonical SMILES:   CCOC(=O)[C@@H]1O[C@H]1C(=O)N[C@@H](CC(C)C)C(=O)NCCC(C)C
Standard InChI:   InChI=1S/C17H30N2O5/c1-6-23-17(22)14-13(24-14)16(21)19-12(9-11(4)5)15(20)18-8-7-10(2)3/h10-14H,6-9H2,1-5H3,(H,18,20)(H,19,21)/t12-,13+,14+/m0/s1
HET Code:   E6D PubChem:   124305757
DrugBank:   - ChEMBL:   -
Molecular Formula:   C17H30N2O5 Mol. Weight:   342.21548 logP:   1.0101
HBD:   2 HBA:   5
#Rotatable Bonds:   10 TPSA:   97.03
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Epoxide Opening CYS 477 A 37.45 10.75 Epoxide
Binding Affinity
-