PDB Entry (5xps) |
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PDB ID: 5xps | Resolution: 1.07 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 30155962 | DOI: 10.1002/cbic.201800378 | |
Protein |
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Protein Name: Transketolase | |
Uniprot ID/ACC: P34736 (TKT_PICST) | Organism: Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis) |
Gene Symbol: TKT | Gene ID: 4837370 |
Protein Class: TRANSFERASE |
Ligand |
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Ligand Name: erythrose-4-phosphate | ||
Canonical SMILES: O[C@H](COP(O)(O)=O)[C@@H](O)C=O | ||
Standard InChI: InChI=1S/C4H9O7P/c5-1-3(6)4(7)2-11-12(8,9)10/h1,3-4,6-7H,2H2,(H2,8,9,10)/t3-,4+/m0/s1 | ||
HET Code: E4P | PubChem: 122357 | |
DrugBank: DB03937 | ChEMBL: CHEMBL1232448 | |
Molecular Formula: C4H9O7P | Mol. Weight: 200.00859 | logP: -1.9836 |
HBD: 4 | HBA: 5 | |
#Rotatable Bonds: 5 | TPSA: 124.29 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Hemi(thio)acetalization | HIS 27 | A | 27.63 | 1.62 | Aldehyde |
Binding Affinity |
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