PDB Entry (3gjr) |
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PDB ID: 3gjr | Resolution: 2.2 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 19283487 | DOI: 10.1007/s10495-009-0333-y | |
Protein |
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Protein Name: Caspase-3 | |
Uniprot ID/ACC: P42574 (CASP3_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: CASP3 | Gene ID: 836 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: Boc-D(OMe)-Fmk | ||
Canonical SMILES: COC(=O)C[C@@H](C(=O)C)NC(=O)OC(C)(C)C | ||
Standard InChI: InChI=1S/C11H19NO5/c1-7(13)8(6-9(14)16-5)12-10(15)17-11(2,3)4/h8H,6H2,1-5H3,(H,12,15)/t8-/m0/s1 | ||
HET Code: DZE | PubChem: 46937089 | |
DrugBank: DB07696 | ChEMBL: CHEMBL1232425 | |
Molecular Formula: C11H19NO5 | Mol. Weight: 245.12633 | logP: 1.0318 |
HBD: 1 | HBA: 5 | |
#Rotatable Bonds: 4 | TPSA: 81.7 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Hemi(thio)acetalization | CYS 163 | A | 24.26 | 11.49 | Ketone |
Binding Affinity |
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