PDB Entry (6l3n)
PDB ID: 6l3n Resolution: 1.83 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31777147 DOI: 10.1002/cbic.201900628
Protein
Protein Name: Malonyl CoA-acyl carrier protein transacylase
Uniprot ID/ACC: A0A1U9Y7T8 (A0A1U9Y7T8_9PSEU) Organism: Actinosynnema pretiosum subsp. pretiosum
Gene Symbol: APASM_3228 Gene ID: -
Protein Class: TRANSFERASE
Ligand
Ligand Name:   2-METHYLMALONIC ACID
Canonical SMILES:   CC(C(O)=O)C(O)=O
Standard InChI:   InChI=1S/C4H6O4/c1-2(3(5)6)4(7)8/h2H,1H3,(H,5,6)(H,7,8)
HET Code:   DXX PubChem:   487
DrugBank:   DB04183 ChEMBL:   CHEMBL1232416
Molecular Formula:   C4H6O4 Mol. Weight:   118.02661 logP:   -0.2083
HBD:   2 HBA:   2
#Rotatable Bonds:   2 TPSA:   74.6
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Acyl Substitution SER 180 A 11.39 - Carboxylic Acid
Binding Affinity
-