PDB Entry (6ksv)
PDB ID: 6ksv Resolution: 2.42 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: 10.1038/s41929-020-0456-7
Protein
Protein Name: Thioesterase
Uniprot ID/ACC: A0A679G4U8 (A0A679G4U8_9ACTN) Organism: Streptomyces albidoflavus
Gene Symbol: surE Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   D-LEUCINE
Canonical SMILES:   CC(C)C[C@@H](N)C(O)=O
Standard InChI:   InChI=1S/C6H13NO2/c1-4(2)3-5(7)6(8)9/h4-5H,3,7H2,1-2H3,(H,8,9)/t5-/m1/s1
HET Code:   DLE PubChem:   439524
DrugBank:   DB01746 ChEMBL:   CHEMBL1232258
Molecular Formula:   C6H13NO2 Mol. Weight:   131.09464 logP:   0.4444
HBD:   2 HBA:   2
#Rotatable Bonds:   3 TPSA:   63.32
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Acyl Substitution SER 63 A 15.29 - Carboxylic Acid
Binding Affinity
-