PDB Entry (1lhf) |
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PDB ID: 1lhf | Resolution: 2.4 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 7893672 | DOI: 10.1021/bi00011a033 | |
Protein |
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Protein Name: Prothrombin | |
Uniprot ID/ACC: P00734 (THRB_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: F2 | Gene ID: 2147 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: AC-(D)PHE-PRO-BOROHOMOLYS-OH | ||
Canonical SMILES: CC(=O)N[C@H](Cc1ccccc1)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CCCCCN)B(O)O | ||
Standard InChI: InChI=1S/C22H35BN4O5/c1-16(28)25-18(15-17-9-4-2-5-10-17)22(30)27-14-8-11-19(27)21(29)26-20(23(31)32)12-6-3-7-13-24/h2,4-5,9-10,18-20,31-32H,3,6-8,11-15,24H2,1H3,(H,25,28)(H,26,29)/t18-,19+,20+/m1/s1 | ||
HET Code: DI4 | PubChem: 5288066 | |
DrugBank: DB07659 | ChEMBL: CHEMBL1232230 | |
Molecular Formula: C22H35BN4O5 | Mol. Weight: 446.27005 | logP: -0.2593 |
HBD: 5 | HBA: 6 | |
#Rotatable Bonds: 12 | TPSA: 144.99 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Borylation | SER 195 | H | 15.27 | - | Boronic Acid |
Binding Affinity |
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Database Name | Value |
PDBBind | Ki : 8.1 nM |