PDB Entry (2o7s) |
||
| ||
PDB ID: 2o7s | Resolution: 1.78 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: 10.1021/cg7007107 | |
Protein |
|
Protein Name: Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic | |
Uniprot ID/ACC: Q9SQT8 (DHQSD_ARATH) | Organism: Arabidopsis thaliana (Mouse-ear cress) |
Gene Symbol: EMB3004 | Gene ID: 819809 |
Protein Class: LYASE |
Ligand |
||
Ligand Name: 3-dehydroquinate | ||
Canonical SMILES: O[C@@H]1C[C@@](O)(CC(=O)[C@H]1O)C(O)=O | ||
Standard InChI: InChI=1S/C7H10O6/c8-3-1-7(13,6(11)12)2-4(9)5(3)10/h3,5,8,10,13H,1-2H2,(H,11,12)/t3-,5+,7-/m1/s1 | ||
HET Code: DHK | PubChem: 439351 | |
DrugBank: DB03868 | ChEMBL: CHEMBL1232338 | |
Molecular Formula: C7H10O6 | Mol. Weight: 190.04774 | logP: -2.1132 |
HBD: 4 | HBA: 5 | |
#Rotatable Bonds: 1 | TPSA: 115.06 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Imine Condensation | LYS 241 | A | 15.41 | 7.12 | Ketone |
Binding Affinity |
||
- |