PDB Entry (1uhv)
PDB ID: 1uhv Resolution: 2.1 Å Exp. Method: X-RAY DIFFRACTION
PMID: 14659747 DOI: 10.1016/j.jmb.2003.10.026
Protein
Protein Name: Beta-xylosidase
Uniprot ID/ACC: P36906 (XYNB_THESA) Organism: Thermoanaerobacterium saccharolyticum
Gene Symbol: xynB Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   2F-DNPX
Canonical SMILES:   O[C@@H]1CO[C@@H]([C@H](F)[C@H]1O)Oc2c([N+]([O-])=O)cc([N+]([O-])=O)cc2
Standard InChI:   InChI=1S/C11H11FN2O8/c12-9-10(16)7(15)4-21-11(9)22-8-2-1-5(13(17)18)3-6(8)14(19)20/h1-3,7,9-11,15-16H,4H2/t7-,9-,10+,11-/m1/s1
HET Code:   DFX PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C11H11FN2O8 Mol. Weight:   318.04996 logP:   0.298
HBD:   2 HBA:   8
#Rotatable Bonds:   4 TPSA:   145.2
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Aliphatic Subsititution GLU 277 A 12.35 11.23 Acetal
Binding Affinity
-