PDB Entry (4cwd) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 4cwd | Resolution: 1.9 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 25164544 | DOI: 10.1002/anie.201406125 | |
Protein |
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Protein Name: Gamma-butyrobetaine dioxygenase | |
Protein Class: OXIDOREDUCTASE | |
Uniprot ID/ACC: O75936 (BODG_HUMAN) | Organism: Homo sapiens |
Gene Symbol: BBOX1 | Gene ID: 8424 |
Pocket Descriptors | |
Volume: 945.728 | Depth: 28.2034 |
Hydrophobicity: 0.678899 | Drug Score: 0.646017 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 4-carboxy-1,1-dimethylpiperidin-1-ium | ||
HET ID: 449 | PubChem: 71385008 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: OC(=O)C1CC[N+](CC1)(C)C | ||
Standard InChI: InChI=1S/C8H15NO2/c1-9(2)5-3-7(4-6-9)8(10)11/h7H,3-6H2,1-2H3/p+1 | ||
Molecular Formula: C8H16NO2+ | Mol. Weight: 158.21814 | Heavy Atoms: 11 |
Charge: 1 | Is Chiral: False | logP: 0.5162 |
HBD: 1 | HBA: 2 | TPSA: 37.3 |
#Bonds: 11 | #Rotatable Bonds: 1 | Shape Complexity: 0.875 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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