PDB Entry (4c5w) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 4c5w | Resolution: 1.7 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 24571165 | DOI: 10.1021/jm401603e | |
Protein |
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Protein Name: Gamma-butyrobetaine dioxygenase | |
Protein Class: OXIDOREDUCTASE | |
Uniprot ID/ACC: O75936 (BODG_HUMAN) | Organism: Homo sapiens |
Gene Symbol: BBOX1 | Gene ID: 8424 |
Pocket Descriptors | |
Volume: 791.744 | Depth: 28.6752 |
Hydrophobicity: 0.691803 | Drug Score: 0.381364 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: ethyl-dimethyl-(4-oxidanyl-4-oxidanylidene-butyl)azanium | ||
HET ID: NM3 | PubChem: 51347809 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: CC[N+](CCCC(=O)O)(C)C | ||
Standard InChI: InChI=1S/C8H17NO2/c1-4-9(2,3)7-5-6-8(10)11/h4-7H2,1-3H3/p+1 | ||
Molecular Formula: C8H18NO2+ | Mol. Weight: 160.23402 | Heavy Atoms: 11 |
Charge: 1 | Is Chiral: False | logP: 0.9475 |
HBD: 1 | HBA: 2 | TPSA: 37.3 |
#Bonds: 10 | #Rotatable Bonds: 5 | Shape Complexity: 0.875 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
Binding MOAD | IC50 : 3300 nM |