PDB Entry (4c5w)

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Visualizer: MichelaNGLo

PDB ID: 4c5w Resolution: 1.7 Å Exp. Method: X-RAY DIFFRACTION
PMID: 24571165 DOI: 10.1021/jm401603e
Protein
Protein Name: Gamma-butyrobetaine dioxygenase
Protein Class: OXIDOREDUCTASE
Uniprot ID/ACC: O75936 (BODG_HUMAN) Organism: Homo sapiens
Gene Symbol: BBOX1 Gene ID: 8424
Pocket Descriptors
Volume: 791.744 Depth: 28.6752
Hydrophobicity: 0.691803 Drug Score: 0.381364
Pocket Similarity: Calculate
Ligand
Ligand Name:   ethyl-dimethyl-(4-oxidanyl-4-oxidanylidene-butyl)azanium
HET ID:   NM3 PubChem:   51347809
DrugBank:   - ChEMBL:   -
Canonical SMILES:   CC[N+](CCCC(=O)O)(C)C
Standard InChI:   InChI=1S/C8H17NO2/c1-4-9(2,3)7-5-6-8(10)11/h4-7H2,1-3H3/p+1
Molecular Formula:   C8H18NO2+ Mol. Weight:   160.23402 Heavy Atoms:   11
Charge:   1 Is Chiral:   False logP:   0.9475
HBD:   1 HBA:   2 TPSA:   37.3
#Bonds:   10 #Rotatable Bonds:   5 Shape Complexity:   0.875
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
Binding MOAD IC50 : 3300 nM