PDB Entry (5h14) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 5h14 | Resolution: 1.9 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 28072869 | DOI: 10.1371/journal.pone.0169855 | |
Protein |
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Protein Name: Polycomb protein EED | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: O75530 (EED_HUMAN) | Organism: Homo sapiens |
Gene Symbol: EED | Gene ID: 8726 |
Pocket Descriptors | |
Volume: 910.72 | Depth: 30.9272 |
Hydrophobicity: 0.703804 | Drug Score: 0.53699 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 2-[3-(3,5-dimethylpyrazol-1-yl)-4-nitro-phenyl]-3,4-dihydro-1H-isoquinoline | ||
HET ID: LQB | PubChem: 2905908 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: Cc1nn(c(c1)C)c1cc(ccc1[N+](=O)[O-])N1CCc2c(C1)cccc2 | ||
Standard InChI: InChI=1S/C20H20N4O2/c1-14-11-15(2)23(21-14)20-12-18(7-8-19(20)24(25)26)22-10-9-16-5-3-4-6-17(16)13-22/h3-8,11-12H,9-10,13H2,1-2H3 | ||
Molecular Formula: C20H20N4O2 | Mol. Weight: 348.3984 | Heavy Atoms: 26 |
Charge: 0 | Is Chiral: False | logP: 4.5482 |
HBD: 0 | HBA: 3 | TPSA: 66.88 |
#Bonds: 29 | #Rotatable Bonds: 3 | Shape Complexity: 0.25 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
Binding MOAD | IC50 : 8760 nM |