PDB Entry (1h3a)

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Visualizer: MichelaNGLo

PDB ID: 1h3a Resolution: 2.85 Å Exp. Method: X-RAY DIFFRACTION
PMID: 12747780 DOI: 10.1021/jm0211218
Protein
Protein Name: Squalene--hopene cyclase
Protein Class: ISOMERASE
Uniprot ID/ACC: P33247 (SQHC_ALIAD) Organism: Alicyclobacillus acidocaldarius
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 628.16 Depth: 53.8111
Hydrophobicity: 0.730357 Drug Score: 0.691047
Pocket Similarity: Calculate
Ligand
Ligand Name:   (2E)-N-ALLYL-4-{[3-(4-BROMOPHENYL)-5-FLUORO-1-METHYL-1H-INDAZOL-6-YL]OXY}-N-METHYL-2-BUTEN-1-AMINE
HET ID:   R04 PubChem:   445990
DrugBank:   DB02139 ChEMBL:   CHEMBL65730
Canonical SMILES:   C=CCN(C/C=C/COc1cc2n(C)nc(c2cc1F)c1ccc(cc1)Br)C
Standard InChI:   InChI=1S/C22H23BrFN3O/c1-4-11-26(2)12-5-6-13-28-21-15-20-18(14-19(21)24)22(25-27(20)3)16-7-9-17(23)10-8-16/h4-10,14-15H,1,11-13H2,2-3H3/b6-5+
Molecular Formula:   C22H23BrFN3O Mol. Weight:   444.33994 Heavy Atoms:   28
Charge:   0 Is Chiral:   False logP:   5.1947
HBD:   0 HBA:   4 TPSA:   30.29
#Bonds:   30 #Rotatable Bonds:   8 Shape Complexity:   0.22727273
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind IC50 : 281 nM
BindingDB IC50 : 281 nM