PDB Entry (6ets)

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Visualizer: MichelaNGLo

PDB ID: 6ets Resolution: 1.33 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31475772 DOI: 10.1002/cmdc.201900441
Protein
Protein Name: Lysine-specific demethylase 4D
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: Q6B0I6 (KDM4D_HUMAN) Organism: Homo sapiens
Gene Symbol: KDM4D Gene ID: 55693
Pocket Descriptors
Volume: 884.736 Depth: 22.5175
Hydrophobicity: 0.663158 Drug Score: 0.547367
Pocket Similarity: Calculate
Ligand
Ligand Name:   [2-(2~{H}-1,2,3,4-tetrazol-5-yl)ethanoylamino]azanium
HET ID:   I1L PubChem:   137332073
DrugBank:   - ChEMBL:   -
Canonical SMILES:   [NH3+]NC(=O)Cc1n[nH]nn1
Standard InChI:   InChI=1S/C3H6N6O/c4-5-3(10)1-2-6-8-9-7-2/h1,4H2,(H,5,10)(H,6,7,8,9)/p+1
Molecular Formula:   C3H7N6O+ Mol. Weight:   143.12727 Heavy Atoms:   10
Charge:   1 Is Chiral:   False logP:   -2.5938
HBD:   3 HBA:   5 TPSA:   111.2
#Bonds:   14 #Rotatable Bonds:   3 Shape Complexity:   0.33333334
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-