PDB Entry (6ets) Download |
||
Visualizer: MichelaNGLo |
||
PDB ID: 6ets | Resolution: 1.33 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 31475772 | DOI: 10.1002/cmdc.201900441 | |
Protein |
|
Protein Name: Lysine-specific demethylase 4D | |
Protein Class: TRANSCRIPTION REGULATOR | |
Uniprot ID/ACC: Q6B0I6 (KDM4D_HUMAN) | Organism: Homo sapiens |
Gene Symbol: KDM4D | Gene ID: 55693 |
Pocket Descriptors | |
Volume: 884.736 | Depth: 22.5175 |
Hydrophobicity: 0.663158 | Drug Score: 0.547367 |
Pocket Similarity: Calculate |
Ligand |
||
Ligand Name: [2-(2~{H}-1,2,3,4-tetrazol-5-yl)ethanoylamino]azanium | ||
HET ID: I1L | PubChem: 137332073 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: [NH3+]NC(=O)Cc1n[nH]nn1 | ||
Standard InChI: InChI=1S/C3H6N6O/c4-5-3(10)1-2-6-8-9-7-2/h1,4H2,(H,5,10)(H,6,7,8,9)/p+1 | ||
Molecular Formula: C3H7N6O+ | Mol. Weight: 143.12727 | Heavy Atoms: 10 |
Charge: 1 | Is Chiral: False | logP: -2.5938 |
HBD: 3 | HBA: 5 | TPSA: 111.2 |
#Bonds: 14 | #Rotatable Bonds: 3 | Shape Complexity: 0.33333334 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
||
- |