PDB Entry (2vvu)

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PDB ID: 2vvu Resolution: 2.3 Å Exp. Method: X-RAY DIFFRACTION
PMID: 19200624 DOI: 10.1016/j.ejmech.2008.12.025
Protein
Protein Name: Coagulation factor X
Protein Class: HYDROLASE
Uniprot ID/ACC: P00742 (FA10_HUMAN) Organism: Homo sapiens
Gene Symbol: F10 Gene ID: 2159
Pocket Descriptors
Volume: 754.688 Depth: 19.5387
Hydrophobicity: 0.683168 Drug Score: 0.365608
Pocket Similarity: Calculate
Ligand
Ligand Name:   5-chloro-N-[(3R)-1-(2-{[2-fluoro-4-(2-oxopyridin-1(2H)-yl)phenyl]amino}-2-oxoethyl)pyrrolidin-3-yl]thiophene-2-carboxamide
HET ID:   H22 PubChem:   42628060
DrugBank:   DB07872 ChEMBL:   CHEMBL557915
Canonical SMILES:   O=C(Nc1ccc(cc1F)n1ccccc1=O)CN1CC[C@H](C1)NC(=O)c1ccc(s1)Cl
Standard InChI:   InChI=1S/C22H20ClFN4O3S/c23-19-7-6-18(32-19)22(31)25-14-8-10-27(12-14)13-20(29)26-17-5-4-15(11-16(17)24)28-9-2-1-3-21(28)30/h1-7,9,11,14H,8,10,12-13H2,(H,25,31)(H,26,29)/t14-/m1/s1
Molecular Formula:   C22H20ClFN4O3S Mol. Weight:   474.9356 Heavy Atoms:   32
Charge:   0 Is Chiral:   True logP:   3.5361
HBD:   2 HBA:   8 TPSA:   111.68
#Bonds:   36 #Rotatable Bonds:   8 Shape Complexity:   0.22727273
Stereocomplexity:   0.045454547 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind Ki : 8 nM
BindingDB Ki : 8 nM