PDB Entry (2pr3)

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Visualizer: MichelaNGLo

PDB ID: 2pr3 Resolution: 1.5 Å Exp. Method: X-RAY DIFFRACTION
PMID: 17581239 DOI: 10.1111/j.1747-0285.2007.00520.x
Protein
Protein Name: Coagulation factor X
Protein Class: HYDROLASE
Uniprot ID/ACC: P00742 (FA10_HUMAN) Organism: Homo sapiens
Gene Symbol: F10 Gene ID: 2159
Pocket Descriptors
Volume: 592.32 Depth: 18.4261
Hydrophobicity: 0.646067 Drug Score: 0.393275
Pocket Similarity: Calculate
Ligand
Ligand Name:   (2R,4R)-N~1~-(4-CHLOROPHENYL)-N~2~-[3-FLUORO-2'-(METHYLSULFONYL)BIPHENYL-4-YL]-4-METHOXYPYRROLIDINE-1,2-DICARBOXAMIDE
HET ID:   237 PubChem:   16741235
DrugBank:   - ChEMBL:   CHEMBL1229814
Canonical SMILES:   CO[C@@H]1C[C@@H](N(C1)C(=O)Nc1ccc(cc1)Cl)C(=O)Nc1ccc(cc1F)c1ccccc1S(=O)(=O)C
Standard InChI:   InChI=1S/C26H25ClFN3O5S/c1-36-19-14-23(31(15-19)26(33)29-18-10-8-17(27)9-11-18)25(32)30-22-12-7-16(13-21(22)28)20-5-3-4-6-24(20)37(2,34)35/h3-13,19,23H,14-15H2,1-2H3,(H,29,33)(H,30,32)/t19-,23-/m1/s1
Molecular Formula:   C26H25ClFN3O5S Mol. Weight:   546.0102 Heavy Atoms:   37
Charge:   0 Is Chiral:   True logP:   5.9742
HBD:   2 HBA:   8 TPSA:   113.19
#Bonds:   42 #Rotatable Bonds:   9 Shape Complexity:   0.23076923
Stereocomplexity:   0.07692308 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
BindingDB IC50 : 0.1599999964237213 nM, IC50 : 1.7000000476837158 nM
Binding MOAD IC50 : 0.1599999964237213 nM