PDB Entry (2xc0)

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Visualizer: MichelaNGLo

PDB ID: 2xc0 Resolution: 2.05 Å Exp. Method: X-RAY DIFFRACTION
PMID: 20650636 DOI: 10.1016/j.bmcl.2010.06.126
Protein
Protein Name: Coagulation factor X
Protein Class: HYDROLASE
Uniprot ID/ACC: P00742 (FA10_HUMAN) Organism: Homo sapiens
Gene Symbol: F10 Gene ID: 2159
Pocket Descriptors
Volume: 864.128 Depth: 19.96
Hydrophobicity: 0.677419 Drug Score: 0.494664
Pocket Similarity: Calculate
Ligand
Ligand Name:   (3R,4R)-1-METHANESULFONYL-PYRROLIDINE-3,4--DICARBOXYLIC ACID 3-[(3-FLUORO-4-METHOXY-PHENYL)-AMIDE] 4-{[2-FLUORO-4-(2-OXO-2H-PYRIDIN-1-YL)-PHENYL]-AMIDE}
HET ID:   8NC PubChem:   46835134
DrugBank:   - ChEMBL:   CHEMBL1222019
Canonical SMILES:   COc1ccc(cc1F)NC(=O)[C@H]1CN(C[C@@H]1C(=O)Nc1ccc(cc1F)n1ccccc1=O)S(=O)(=O)C
Standard InChI:   InChI=1S/C25H24F2N4O6S/c1-37-22-9-6-15(11-20(22)27)28-24(33)17-13-30(38(2,35)36)14-18(17)25(34)29-21-8-7-16(12-19(21)26)31-10-4-3-5-23(31)32/h3-12,17-18H,13-14H2,1-2H3,(H,28,33)(H,29,34)/t17-,18-/m0/s1
Molecular Formula:   C25H24F2N4O6S Mol. Weight:   546.5431 Heavy Atoms:   38
Charge:   0 Is Chiral:   True logP:   3.3738
HBD:   2 HBA:   10 TPSA:   135.19
#Bonds:   43 #Rotatable Bonds:   9 Shape Complexity:   0.24
Stereocomplexity:   0.08 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind Ki : 192 nM
BindingDB Ki : 192 nM
Binding MOAD Ki : 192 nM