PDB Entry (2xby)

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Visualizer: MichelaNGLo

PDB ID: 2xby Resolution: 2.02 Å Exp. Method: X-RAY DIFFRACTION
PMID: 20650636 DOI: 10.1016/j.bmcl.2010.06.126
Protein
Protein Name: Coagulation factor X
Protein Class: HYDROLASE
Uniprot ID/ACC: P00742 (FA10_HUMAN) Organism: Homo sapiens
Gene Symbol: F10 Gene ID: 2159
Pocket Descriptors
Volume: 611.904 Depth: 25.1078
Hydrophobicity: 0.681319 Drug Score: 0.32281
Pocket Similarity: Calculate
Ligand
Ligand Name:   (3R,4R)-1-METHYLCARBAMOYLMETHYL-PYRROLIDINE-3,4-DICARBOXYLIC ACID 3-[(4-CHLORO-PHENYL)-AMIDE] 4-{[2-FLUORO-4-(2-OXO-2H-PYRIDIN-1-YL)-PHENYL]-AMIDE}
HET ID:   63C PubChem:   11329945
DrugBank:   - ChEMBL:   CHEMBL1230462
Canonical SMILES:   CNC(=O)CN1CC(C(C1)C(=O)NC2=C(C=C(C=C2)N3C=CC=CC3=O)F)C(=O)NC4=CC=C(C=C4)Cl
Standard InChI:   InChI=1S/C26H25ClFN5O4/c1-29-23(34)15-32-13-19(25(36)30-17-7-5-16(27)6-8-17)20(14-32)26(37)31-22-10-9-18(12-21(22)28)33-11-3-2-4-24(33)35/h2-12,19-20H,13-15H2,1H3,(H,29,34)(H,30,36)(H,31,37)
Molecular Formula:   C26H25ClFN5O4 Mol. Weight:   525.9592 Heavy Atoms:   37
Charge:   0 Is Chiral:   True logP:   2.976
HBD:   3 HBA:   9 TPSA:   112.54
#Bonds:   40 #Rotatable Bonds:   10 Shape Complexity:   0.23076923
Stereocomplexity:   0.07692308 Ligand Type:   Small Molecule
Binding Affinity
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