PDB Entry (1fjs)

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Visualizer: MichelaNGLo

PDB ID: 1fjs Resolution: 1.92 Å Exp. Method: X-RAY DIFFRACTION
PMID: 11027132 DOI: None
Protein
Protein Name: Coagulation factor X
Protein Class: HYDROLASE
Uniprot ID/ACC: P00742 (FA10_HUMAN) Organism: Homo sapiens
Gene Symbol: F10 Gene ID: 2159
Pocket Descriptors
Volume: 697.088 Depth: 19.2914
Hydrophobicity: 0.664894 Drug Score: 0.478765
Pocket Similarity: Calculate
Ligand
Ligand Name:   N-[2-[5-[AMINO(IMINO)METHYL]-2-HYDROXYPHENOXY]-3,5-DIFLUORO-6-[3-(4,5-DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL)PHENOXY]PYRIDIN-4-YL]-N-METHYLGLYCINE
HET ID:   Z34 PubChem:   4322
DrugBank:   - ChEMBL:   CHEMBL73193
Canonical SMILES:   OC(=O)CN(c1c(F)c(Oc2cccc(c2)C2=NCCN2C)nc(c1F)Oc1cc(ccc1O)C(=N)N)C
Standard InChI:   InChI=1S/C25H24F2N6O5/c1-32-9-8-30-23(32)14-4-3-5-15(10-14)37-24-19(26)21(33(2)12-18(35)36)20(27)25(31-24)38-17-11-13(22(28)29)6-7-16(17)34/h3-7,10-11,34H,8-9,12H2,1-2H3,(H3,28,29)(H,35,36)
Molecular Formula:   C25H24F2N6O5 Mol. Weight:   526.49207 Heavy Atoms:   38
Charge:   0 Is Chiral:   False logP:   3.3204
HBD:   4 HBA:   11 TPSA:   157.59
#Bonds:   41 #Rotatable Bonds:   9 Shape Complexity:   0.2
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind Ki : 0.10999999940395355 nM
BindingDB Ki : 0.10999999940395355 nM
Binding MOAD Ki : 0.10999999940395355 nM