PDB Entry (2bq7)

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Visualizer: MichelaNGLo

PDB ID: 2bq7 Resolution: 2.2 Å Exp. Method: X-RAY DIFFRACTION
PMID: 15999990 DOI: 10.1021/jm0490540
Protein
Protein Name: Coagulation factor X
Protein Class: HYDROLASE
Uniprot ID/ACC: P00742 (FA10_HUMAN) Organism: Homo sapiens
Gene Symbol: F10 Gene ID: 2159
Pocket Descriptors
Volume: 613.696 Depth: 20.5446
Hydrophobicity: 0.645833 Drug Score: 0.278786
Pocket Similarity: Calculate
Ligand
Ligand Name:   N-(1-ISOPROPYLPIPERIDIN-4-YL)-1-(3-METHOXYBENZYL)-1H-INDOLE-2-CARBOXAMIDE
HET ID:   IID PubChem:   6540267
DrugBank:   DB07973 ChEMBL:   CHEMBL182323
Canonical SMILES:   COc1cccc(c1)Cn1c(cc2c1cccc2)C(=O)NC1CCN(CC1)C(C)C
Standard InChI:   InChI=1S/C25H31N3O2/c1-18(2)27-13-11-21(12-14-27)26-25(29)24-16-20-8-4-5-10-23(20)28(24)17-19-7-6-9-22(15-19)30-3/h4-10,15-16,18,21H,11-14,17H2,1-3H3,(H,26,29)
Molecular Formula:   C25H31N3O2 Mol. Weight:   405.53253 Heavy Atoms:   30
Charge:   0 Is Chiral:   False logP:   4.6296
HBD:   1 HBA:   5 TPSA:   46.5
#Bonds:   33 #Rotatable Bonds:   7 Shape Complexity:   0.4
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind Ki : 89 nM
BindingDB Ki : 89 nM
Binding MOAD Ki : 89 nM