PDB Entry (2xc5)

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Visualizer: MichelaNGLo

PDB ID: 2xc5 Resolution: 1.7 Å Exp. Method: X-RAY DIFFRACTION
PMID: 20650636 DOI: 10.1016/j.bmcl.2010.06.126
Protein
Protein Name: Coagulation factor X
Protein Class: HYDROLASE
Uniprot ID/ACC: P00742 (FA10_HUMAN) Organism: Homo sapiens
Gene Symbol: F10 Gene ID: 2159
Pocket Descriptors
Volume: 784.064 Depth: 19.8917
Hydrophobicity: 0.668224 Drug Score: 0.356646
Pocket Similarity: Calculate
Ligand
Ligand Name:   (3R,4R)-1-METHANESULFONYL-PYRROLIDINE-3,4-DICARBOXYLIC ACID 3-[(4-CHLORO-3-FLUORO-PHENYL)-AMIDE] 4-{[2-FLUORO-4-(2-OXO-2H-PYRIDIN-1-YL)-PHENYL]-AMIDE}
HET ID:   OYJ PubChem:   11238193
DrugBank:   - ChEMBL:   CHEMBL1222130
Canonical SMILES:   O=C([C@H]1CN(C[C@@H]1C(=O)Nc1ccc(c(c1)F)Cl)S(=O)(=O)C)Nc1ccc(cc1F)n1ccccc1=O
Standard InChI:   InChI=1S/C24H21ClF2N4O5S/c1-37(35,36)30-12-16(23(33)28-14-5-7-18(25)19(26)10-14)17(13-30)24(34)29-21-8-6-15(11-20(21)27)31-9-3-2-4-22(31)32/h2-11,16-17H,12-13H2,1H3,(H,28,33)(H,29,34)/t16-,17-/m0/s1
Molecular Formula:   C24H21ClF2N4O5S Mol. Weight:   550.96216 Heavy Atoms:   37
Charge:   0 Is Chiral:   True logP:   4.0186
HBD:   2 HBA:   9 TPSA:   125.96
#Bonds:   42 #Rotatable Bonds:   8 Shape Complexity:   0.20833333
Stereocomplexity:   0.083333336 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
BindingDB Ki : 62 nM
Binding MOAD Ki : 62 nM