PDB Entry (1v3x) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 1v3x | Resolution: 2.2 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 15456260 | DOI: 10.1021/jm049884d | |
Protein |
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Protein Name: Coagulation factor X | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: P00742 (FA10_HUMAN) | Organism: Homo sapiens |
Gene Symbol: F10 | Gene ID: 2159 |
Pocket Descriptors | |
Volume: 593.984 | Depth: 18.5257 |
Hydrophobicity: 0.682927 | Drug Score: 0.51416 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: (2R)-4-[(6-CHLORO-2-NAPHTHYL)SULFONYL]-1-[(5-METHYL-4,5,6,7-TETRAHYDRO[1,3]THIAZOLO[5,4-C]PYRIDIN-2-YL)CARBONYL]PIPERAZINE-2-CARBOXAMIDE | ||
HET ID: D76 | PubChem: 448997 | |
DrugBank: - | ChEMBL: CHEMBL1232084 | |
Canonical SMILES: CN1CCc2c(C1)sc(n2)C(=O)N1CCN(C[C@@H]1C(=O)N)S(=O)(=O)c1ccc2c(c1)ccc(c2)Cl | ||
Standard InChI: InChI=1S/C23H24ClN5O4S2/c1-27-7-6-18-20(13-27)34-22(26-18)23(31)29-9-8-28(12-19(29)21(25)30)35(32,33)17-5-3-14-10-16(24)4-2-15(14)11-17/h2-5,10-11,19H,6-9,12-13H2,1H3,(H2,25,30)/t19-/m1/s1 | ||
Molecular Formula: C23H24ClN5O4S2 | Mol. Weight: 534.0508 | Heavy Atoms: 35 |
Charge: 0 | Is Chiral: True | logP: 3.533 |
HBD: 1 | HBA: 10 | TPSA: 153.53 |
#Bonds: 40 | #Rotatable Bonds: 5 | Shape Complexity: 0.3478261 |
Stereocomplexity: 0.04347826 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
PDBBind | IC50 : 24 nM |
BindingDB | IC50 : 24 nM |
Binding MOAD | IC50 : 24 nM |