PDB Entry (2p93)

Download

Visualizer: MichelaNGLo

PDB ID: 2p93 Resolution: 1.9 Å Exp. Method: X-RAY DIFFRACTION
PMID: 17588746 DOI: 10.1016/j.bmcl.2007.06.029
Protein
Protein Name: Coagulation factor X
Protein Class: HYDROLASE
Uniprot ID/ACC: P00742 (FA10_HUMAN) Organism: Homo sapiens
Gene Symbol: F10 Gene ID: 2159
Pocket Descriptors
Volume: 604.864 Depth: 18.5559
Hydrophobicity: 0.657303 Drug Score: 0.35173
Pocket Similarity: Calculate
Ligand
Ligand Name:   5-CHLORO-N-(2-(4-(2-OXOPYRIDIN-1(2H)-YL)BENZAMIDO)ETHYL)THIOPHENE-2-CARBOXAMIDE
HET ID:   ME1 PubChem:   10250490
DrugBank:   DB08173 ChEMBL:   CHEMBL232566
Canonical SMILES:   Clc1ccc(s1)C(=O)NCCNC(=O)c1ccc(cc1)n1ccccc1=O
Standard InChI:   InChI=1S/C19H16ClN3O3S/c20-16-9-8-15(27-16)19(26)22-11-10-21-18(25)13-4-6-14(7-5-13)23-12-2-1-3-17(23)24/h1-9,12H,10-11H2,(H,21,25)(H,22,26)
Molecular Formula:   C19H16ClN3O3S Mol. Weight:   401.86664 Heavy Atoms:   27
Charge:   0 Is Chiral:   False logP:   3.494
HBD:   2 HBA:   7 TPSA:   108.44
#Bonds:   29 #Rotatable Bonds:   8 Shape Complexity:   0.10526316
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind Ki : 1.5 nM
BindingDB Ki : 1.5 nM
Binding MOAD Ki : 1.5 nM