PDB Entry (5k0h)

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Visualizer: MichelaNGLo

PDB ID: 5k0h Resolution: 2.2 Å Exp. Method: X-RAY DIFFRACTION
PMID: 16848746 DOI: 10.2174/157340606777724040
Protein
Protein Name: Coagulation factor X
Protein Class: HYDROLASE
Uniprot ID/ACC: P00742 (FA10_HUMAN) Organism: Homo sapiens
Gene Symbol: F10 Gene ID: 2159
Pocket Descriptors
Volume: 516.608 Depth: 19.4072
Hydrophobicity: 0.674699 Drug Score: 0.285477
Pocket Similarity: Calculate
Ligand
Ligand Name:   O-benzyl-N-(benzylsulfonyl)-D-seryl-N-[(4-carbamimidoylphenyl)methyl]glycinamide
HET ID:   6PK PubChem:   9937041
DrugBank:   - ChEMBL:   CHEMBL4238121
Canonical SMILES:   O=C(CNC(=O)[C@H](NS(=O)(=O)Cc1ccccc1)COCc1ccccc1)NCc1ccc(cc1)C(=N)N
Standard InChI:   InChI=1S/C27H31N5O5S/c28-26(29)23-13-11-20(12-14-23)15-30-25(33)16-31-27(34)24(18-37-17-21-7-3-1-4-8-21)32-38(35,36)19-22-9-5-2-6-10-22/h1-14,24,32H,15-19H2,(H3,28,29)(H,30,33)(H,31,34)/t24-/m1/s1
Molecular Formula:   C27H31N5O5S Mol. Weight:   537.63055 Heavy Atoms:   38
Charge:   0 Is Chiral:   True logP:   4.4616
HBD:   5 HBA:   10 TPSA:   171.85
#Bonds:   41 #Rotatable Bonds:   16 Shape Complexity:   0.22222222
Stereocomplexity:   0.037037037 Ligand Type:   Small Molecule
Binding Affinity
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