PDB Entry (2w3i)

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PDB ID: 2w3i Resolution: 1.9 Å Exp. Method: X-RAY DIFFRACTION
PMID: 19231206 DOI: 10.1016/j.bmc.2009.01.063
Protein
Protein Name: Coagulation factor X
Protein Class: HYDROLASE
Uniprot ID/ACC: P00742 (FA10_HUMAN) Organism: Homo sapiens
Gene Symbol: F10 Gene ID: 2159
Pocket Descriptors
Volume: 609.92 Depth: 20.7307
Hydrophobicity: 0.641711 Drug Score: 0.301438
Pocket Similarity: Calculate
Ligand
Ligand Name:   (2R,4S)-N^1^-(4-chlorophenyl)-4-(2,4-difluorophenyl)-4-hydroxy-N^2^-(2-oxo-2H-1,3'-bipyridin-6'-yl)pyrrolidine-1,2-dicarboxamide
HET ID:   L1C PubChem:   25210468
DrugBank:   - ChEMBL:   CHEMBL474678
Canonical SMILES:   O=C([C@H]1C[C@](CN1C(=O)Nc1ccc(cc1)Cl)(O)c1ccc(cc1F)F)Nc1ccc(cn1)n1ccccc1=O
Standard InChI:   InChI=1S/C28H22ClF2N5O4/c29-17-4-7-19(8-5-17)33-27(39)36-16-28(40,21-10-6-18(30)13-22(21)31)14-23(36)26(38)34-24-11-9-20(15-32-24)35-12-2-1-3-25(35)37/h1-13,15,23,40H,14,16H2,(H,33,39)(H,32,34,38)/t23-,28-/m1/s1
Molecular Formula:   C28H22ClF2N5O4 Mol. Weight:   565.9552 Heavy Atoms:   40
Charge:   0 Is Chiral:   True logP:   4.3807
HBD:   3 HBA:   9 TPSA:   116.56
#Bonds:   45 #Rotatable Bonds:   8 Shape Complexity:   0.14285715
Stereocomplexity:   0.071428575 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind IC50 : 0.10000000149011612 nM
BindingDB IC50 : 0.10000000149011612 nM, IC50 : 1.3200000524520874 nM
Binding MOAD IC50 : 0.10000000149011612 nM